Author

Anna Simpson

California Institute of TechnologyORCID 0000-0002-9633-4675Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1

Frequent Co-Authors

Kasthuri VenkateswaraniD· 2 shared Alexander MahnertiD· 1 shared Alper BülbüliD· 1 shared Ceth W. ParkeriD· 1 shared Davis BoneiD· 1 shared Deniz Ece KayaiD· 1 shared Ella RushtoniD· 1 shared Jack A. GilbertiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMicrobiology

Kasthuri VenkateswaranORCID

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2 papers

Recent·Most cited

Spatiotemporal Microbial Ecoevolutionary Dynamics on the International Space Station

Megan Hill, Anna Simpson, Vanessa R. Minnis, Mariana C. Salas Garcia, Alexander Mahnert, Simon M. Lax, Ella Rushton, Ryan K. Chung, Davis Bone, Ceth W. Parker, Sarah M. Allard, Molly A. Matty, Kasthuri Venkateswaran, Jack A. Gilbert

This study analyzes the ISS microbiome over seven years, revealing stable core communities with localized microevolution and AMR/virulence dynamics that require functional validation.

bioRxiv · Oct 28, 2025 · PreprintMicrobiology

Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis

Lukasz M. Szydlowski, Alper Bülbül, Anna Simpson, Deniz Ece Kaya, Nitin Kumar Singh, Osman Uğur Sezerman, Paweł P. Łabaj, Tomasz Kościółek, Kasthuri Venkateswaran

The paper functionally annotates genomes of ISS-isolated bacteria and identifies adaptations to space conditions through comparative genomics and proteome analysis.

Microbiome · Oct 4, 2024Peer-reviewedBioinformatics