Author

Xihui Liu

Shanghai Artificial Intelligence LaboratoryORCID 0000-0002-9716-1032Unclaimed ORCID profile · follow to get notified of new preprints

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Approach:transformer / foundation model· 1

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Dong YuaniD· 1 shared Hong-Liang YaniD· 1 shared Hongtai Jing· 1 shared Lifeng Qiao· 1 shared Peng YeiD· 1 shared Sheng Yong XuiD· 1 shared Siqi SuniD· 1 shared Wanli OuyangiD· 1 shared

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1 shared paperBioinformatics

Dong YuanORCID

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1 paper

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BioinformaticsbioRxivPreprintJun 22, 2024

BEACON: Benchmark for Comprehensive RNA Tasks and Language Models

Yuchen Ren, Zhiyuan Chen, Lifeng Qiao…·Xihui Liu

BEACON introduces a comprehensive RNA benchmark to evaluate deep learning models, finding that single nucleotide tokenization and ALiBi improve performance.

4 citations

bulk RNA-seqdeep learning