Siqi Sun

RTM-align improves RNA structure alignment by addressing size dependency and short fragment handling, outperforming existing tools in accuracy and reliability.

BEACON introduces a comprehensive RNA benchmark to evaluate deep learning models, finding that single nucleotide tokenization and ALiBi improve performance.

π-PrimeNovo is a non-autoregressive deep learning model for de novo peptide sequencing that achieves higher accuracy and 69x faster performance than existing methods.