Vikas Kumar

ARACRA: Automated RNA-seq Analysis for Chemical Risk Assessment

ARACRA automates RNA-seq analysis for chemical risk assessment, providing a pipeline from raw data to transcriptomics Point of Departure with quality control and human-in-the-loop review.

AOPWIKI-EXPLORER: An Interactive Graph-based Query Engine leveraging Large Language Models

The paper introduces an interactive graph-based query engine for AOP wiki data using large language models to enhance exploration and integration of adverse outcome pathway networks.

Design principles of ROS dynamic networks relevant to precision therapies for age-related diseases

The paper models the ROS regulatory network to show how its dysfunction contributes to age-related diseases like Parkinson's and suggests potential therapeutic interventions.