Author

Yue Jiang

Hospital for Sick ChildrenORCID 0000-0002-9848-428XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Yue Jiang1 paper

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Arun K RamaniiD· 2 shared Cynthia E HawkinsiD· 2 shared Mia HusićiD· 2 shared Michael BrudnoiD· 2 shared Michael J. ApostolidesiD· 2 shared Robert SiddawayiD· 2 shared Andrei L. TurinskyiD· 1 shared Bo LiuiD· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersBioinformatics

Arun K RamaniORCID

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3 papers

Recent·Most cited

MetaFusion: A high-confidence metacaller for filtering and prioritizing RNA-seq gene fusion candidates.

Michael J. Apostolides, Yue Jiang, Mia Husić, Robert Siddaway, Cynthia E Hawkins, Andrei L. Turinsky, Michael Brudno, Arun K Ramani

MetaFusion improves fusion detection by combining multiple callers, achieving higher precision and recall through standardized annotation and graph clustering.

Bioinformatics · Apr 19, 2021Peer-reviewedBioinformatics

Long-read-based Human Genomic Structural Variation Detection with cuteSV

Tao Jiang, Yongzhuang Liu, Yue Jiang, Junyi Li, Yan Ping Gao, Zhe Cui, Bo Liu, Yadong Wang

cuteSV improves structural variation detection in long-read sequencing by combining signature-based methods with clustering and refinement, achieving better performance on real datasets.

Genome biology · Aug 3, 2020Peer-reviewedBioinformatics

Found in Transcription: Gene fusions arise through defects in RNA processing in the absence of chromosomal rearrangements.

Yue Jiang, Michael J. Apostolides, Mia Husić, Robert Siddaway, Man Yu, Stephanie Mark, Arun K Ramani, Cynthia E Hawkins, Michael Brudno

The paper identifies RNA-specific gene fusions in tumors and normal tissues, showing they are linked to spliceosomal gene dysregulation and may contribute to cancer development.

bioRxiv · Oct 30, 2019 · PreprintGenomics