Author

Jörg Ackermann

Goethe University FrankfurtORCID 0000-0002-9942-0958Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Ina KochiD· 4 shared Jennifer HannigiD· 3 shared Leonie K. AmsteiniD· 3 shared Ivan ĐikićiD· 2 shared Afsheen YousafiD· 1 shared Alireza BeygiiD· 1 shared Andreas G. ChiocchettiiD· 1 shared Börje Schweizer· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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4 shared papersSystems Biology

Ina KochORCID

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4 papers

Recent·Most cited

Systems BiologybioRxivPreprintApr 2, 2023

Stochastic modeling of the dynamics of Salmonella infection of epithelial cells

Jennifer Hannig, Alireza Beygi, Jörg Ackermann…·Ina Koch

This paper develops a stochastic model to simulate Salmonella infection dynamics in epithelial cells, predicting infection rates and bacterial load over time.

DOI 10.1101/2023.04.02.535247

humanstatistical model

𝕏 PostBluesky

Systems BiologybioRxivPreprintNov 2, 2021

Mathematical modeling of the molecular switch of TNFR1-mediated signaling pathways using Petri nets

Leonie K. Amstein, Jörg Ackermann, Jennifer Hannig…·Ina Koch

The paper constructs a Petri net model of TNFR1 signaling pathways to analyze cell survival, apoptosis, and necroptosis outcomes.

2 citations

statistical model

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedAug 8, 2018

isiKnock: in silico knockouts in biochemical pathways

Jennifer Hannig, Heiko Giese, Börje Schweizer…·Ina Koch

isiKnock predicts biological system behavior after knockouts using transition and Manatee invariants in biochemical pathway models.

8 citations

statistical modelsoftware / tool

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJun 3, 2018

Mapping the genetics of neuropsychological traits to the molecular network of the human brain using a data integrative approach

Afsheen Yousaf, Eftichia Duketis, Tomasz Antoni Jarczok…·Ina Koch

The paper integrates genetic and transcriptome data to link neuropsychological traits to brain gene networks, identifying IQ-associated genetic variants in an autism cohort.

6 citations

humanbulk RNA-seq

𝕏 PostBluesky