Author

Sandipan Ray

Indian Institute of Technology HyderabadORCID 0000-0002-9960-5768Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:metabolomics· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Akhilesh B. ReddyiD· 2 shared Utham K. ValekunjaiD· 2 shared András Dávid NagyiD· 1 shared Bhanu Teja KorraiD· 1 shared Filipa Rijo‐FerreiraiD· 1 shared Guillaume ReyiD· 1 shared James I. MacRaeiD· 1 shared Kavita KundaliD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersNeuroscience

Akhilesh B. ReddyORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 18, 2026

PlasmoRhythm: A comprehensive database for malaria-associated rhythmic transcripts, proteins, and metabolites

Sourbh Rankawat, Kavita Kundal, Subashani Singh…·Sandipan Ray

PlasmoRhythm integrates time-resolved omics data from malaria parasites, hosts, and vectors to enable comparative analysis of rhythmic molecular profiles.

DOI 10.64898/2026.10.11.758397

humanmouse

NeuroscienceCommunications BiologyPeer-reviewedAug 19, 2022

Single-cell transcriptomics and cell-specific proteomics reveals molecular signatures of sleep

Pawan Kumar Jha, Utham K. Valekunja, Sandipan Ray…·Akhilesh B. Reddy

The paper uses single-cell RNA sequencing and cell-type specific proteomics to study sleep's molecular effects, finding cell-specific transcriptional, translational, and post-translational responses to sleep need.

56 citationstop 2%

humanscRNA-seq

Systems BiologyMolecular Systems BiologyPeer-reviewedAug 1, 2018

Non-canonical circadian oscillations in Drosophila S2 cells drive gene-expression cycles coupled to metabolic oscillations

Guillaume Rey, Nikolay B. Milev, Utham K. Valekunja…·Akhilesh B. Reddy

The paper shows Drosophila S2 cells exhibit daily gene and metabolic oscillations without canonical circadian regulators.

68 citationstop 2%

Drosophilabulk RNA-seq