Author

Isabel Duarte

Algarve Biomedical CenterORCID 0000-0003-0060-2936Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Assay:GWAS summary statistics· 1 Assay:imaging· 1

Frequent Co-Authors

Ramiro MagnoiD· 3 shared Raquel P. AndradeiD· 2 shared Ana Cristina Maia-FernandesiD· 1 shared Ana Martins-JesusiD· 1 shared Ana-Teresa MaiaiD· 1 shared Marta LiberiD· 1 shared Martijn A. Huynen· 1 shared Nísia Borralho-MartinsiD· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 18 mutual co-author links

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3 shared papersBioinformatics

Ramiro MagnoORCID

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4 papers

Recent·Most cited

Developmental BiologyPLoS ONEPeer-reviewedApr 18, 2024

SPATIO-TEMPORAL DYNAMICS OF EARLY SOMITE SEGMENTATION IN THE CHICKEN EMBRYO

Ana Cristina Maia-Fernandes, Ana Martins-Jesus, Nísia Borralho-Martins…·Raquel P. Andrade

This study uses time-lapse imaging to analyze the spatio-temporal dynamics of early somite segmentation in chicken embryos, revealing differences in formation rates and coupling with the somitogenesis clock.

4 citations

imagingexperimental assay

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BioinformaticsBioinformaticsPeer-reviewedJul 12, 2021

quincunx: an R package to query, download and wrangle PGS Catalog data

Ramiro Magno, Isabel Duarte, Ana-Teresa Maia

quincunx provides an R interface to query and manage polygenic score data from the PGS Catalog.

4 citations

GWAS summary statisticsstatistical model

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BioinformaticsbioRxivPreprintFeb 25, 2021

FrozenChicken: Promoting the meta-analysis of chicken microarray data

Isabel Duarte, Marta Liber, Ramiro Magno, Raquel P. Andrade

FrozenChicken provides frozen vectors for chicken microarray data to facilitate meta-analysis in vertebrate development studies.

DOI 10.1101/2021.02.25.432894

bulk RNA-seqexperimental assay

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintJan 8, 2019

Contribution of Lateral Gene Transfer to the evolution of the eukaryotic fungus Piromyces sp. E2: Massive bacterial transfer of genes involved in carbohydrate metabolism

Isabel Duarte, Martijn A. Huynen

This study identifies 704 lateral gene transfer candidates in Piromyces sp. E2, mostly from gut bacteria, with a significant over-representation in carbohydrate metabolism functions.

DOI 10.1101/514042

mousewhole-genome sequencing

𝕏 PostBluesky