FrozenChicken: Promoting the meta-analysis of chicken microarray data
Isabel DuarteiD, Marta LiberiD, Ramiro MagnoiD, Raquel P. AndradeiD
Abstract
The FrozenChicken RData package, contains the frozen vectors for the commercially available (in situ oligonucleotide) Affymetrix Chicken Genome Array (GEO platform id GPL3213). This package will promote, simplify, and ease the meta-analysis of chicken microarray data by the research community studying vertebrate development using the chick model organism. The package is freely available in https://github.com/iduarte/FrozenChicken. (*Equal contribution.)
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The Avian RNAseq Consortium: a community effort to annotate the chicken genome
Jacqueline Smith, David W. Burt, the Avian RNAseq Consortium·bioRxiv·Dec 12, 2014
- Combination of novel and public RNA-seq datasets to generate an mRNA expression atlas for the domestic chicken
Stephen J. Bush, Lucy J. Freem, … David Arthur Hume·BMC GenomicsPeer-reviewed·Aug 7, 2018
- GEGA (Gallus Enriched Gene Annotation): an online tool providing genomics and functional information across 47 tissues for a chicken gene-enriched atlas gathering Ensembl & Refseq genome annotations
Fabien Degalez, Philippe Bardou, Sandrine Lagarrigue·NAR Genomics and BioinformaticsPeer-reviewed·Jul 2, 2024
- A Gene Expression Atlas of Lohmann White Chickens
Jiannan Zhang, Xinglong Wang, … Yajun Wang·bioRxiv·Jul 30, 2022
- Gut Microbial succession during conventionalization of germfree chicken
M. Thomas, S. Wongkuna, … J. Scaria·bioRxiv·Jul 3, 2018
- INTEGRATED GLOBAL CHICKEN REFERENCE PANEL FROM 13,187 CHICKEN GENOMES
Di Zhu, Yuzhan Wang, … Xiaoxiang Hu·bioRxiv·Dec 12, 2023