Author
Ludwig-Maximilians-Universität MünchenORCID 0000-0003-0157-8384Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
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Constantin Ammar, Gergely Csaba, Armin Hadziahmetovic…·Ralf Zimmer
The paper introduces MS-EmpiReS, a method to detect differential alternative splicing in proteomics data, identifying cancer-relevant splicing candidates and showing correlation with RNA sequencing.
Gergely Csaba, Evi Berchtold, Armin Hadziahmetovic…·Ralf Zimmer
EmpiReS improves detection of differentially expressed and alternatively spliced genes using fold change analysis with empirical error estimation.
Constantin Ammar, Markus Gruber, Gergely Csaba, Ralf Zimmer
MS-EmpiRe improves detection of differentially abundant proteins by using peptide-level noise distributions, doubling correct identifications at FDR cutoffs compared to existing tools.