Author

Zhen He

La Trobe UniversityORCID 0000-0003-0302-5775Unclaimed ORCID profile · follow to get notified of new preprints

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Zhen He2 papers · Dalian University of Technology

Biology Disciplines

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Animal Behavior & Cognition· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Assay:imaging· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Brandon VictoriD· 1 shared Hongde LiuiD· 1 shared Jemma G. GasperoniiD· 1 shared Jing MengiD· 1 shared Joshua MillwardiD· 1 shared Long Nguyen· 1 shared Natasha Ruth· 1 shared Sarah MeleiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Brandon VictorORCID

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2 papers

Recent·Most cited

Animal Behavior & CognitionDisease Models & MechanismsPeer-reviewedJan 22, 2026

SAMBA: A Segment Anything Model-based tool for semi-automated Behavioural Analysis of Drosophila and other model organisms

Sarah Mele, Joshua Millward, Long Nguyen…·Travis K. Johnson

SAMBA provides a semi-automated tool for behavioural analysis using SAM2, enabling phenotyping of Drosophila and other organisms without specialized equipment or coding.

1 citation

Drosophilazebrafish

𝕏 PostBluesky

BioinformaticsBriefings in BioinformaticsPeer-reviewedOct 27, 2020

DeepSSV: detecting somatic small variants in paired tumor and normal sequencing data with convolutional neural network

Jing Meng, Brandon Victor, Zhen He…·Taijiao Jiang

DeepSSV detects somatic small variants in paired tumor and normal sequencing data using a convolutional neural network, achieving better performance than existing methods in F1 score.

14 citations

whole-exome sequencingdeep learning

𝕏 PostBluesky