Author

Stephan Winter

Leibniz Institute DSMZ – German Collection of Microorganisms and Cell CulturesORCID 0000-0003-0309-9934Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Pathology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Organism:chicken / avian· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Samar SheatiD· 3 shared Boas PuckeriD· 2 shared Adilson Lopes Lima· 1 shared Bethany Fallon EconopoulyiD· 1 shared Corinna ThobeniD· 1 shared Cristiane Ramos de JesusiD· 1 shared H. S. RochaiD· 1 shared Helton Fleck SilveiraiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersPathology

Samar SheatORCID

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3 papers

Recent·Most cited

PathologyFrontiers in Plant SciencePeer-reviewedMay 28, 2026

Rhizoctonia theobromae associated with a severe witches' broom outbreak in cassava of the Brazilian rainforest and evidence of its Southeast Asian origin

Saulo Alves Santos de Oliveira, Samar Sheat, Paolo Margaria…·Stephan Winter

This study identifies Rhizoctonia theobromae as the causal agent of cassava witches' broom disease in Brazil and suggests its recent introduction from Southeast Asia.

5 citationstop 1%

plant (other)DNA methylation

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Plant BiologybioRxivPreprintApr 29, 2025

Identification of immune response genes of cassava during early phases of cassava brown streak virus infection

Jessica Lilienthal, Stephan Winter, Boas Pucker, Samar Sheat

This study identifies immune response genes in cassava during early CBSV infection by comparing gene expression in resistant and susceptible lines.

1 citation

chicken / avianbulk RNA-seq

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GenomicsG3 Genes Genomes GeneticsPeer-reviewedApr 16, 2025

The haplotype-resolved assembly of COL40 a cassava (Manihot esculenta) line with broad-spectrum resistance against viruses causing Cassava brown streak disease unveils a region of highly repeated elements on chromosome 12

Corinna Thoben, Boas Pucker, Stephan Winter…·Samar Sheat

The paper reports a high-quality haplotype-resolved genome assembly of a cassava line resistant to cassava brown streak disease, revealing structural variations linked to resistance.

1 citation

plant (other)whole-genome sequencing

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