Author

Sonal Gupta

Birla Institute of Scientific ResearchORCID 0000-0003-0379-1170Unclaimed ORCID profile · follow to get notified of new preprints

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Sonal Gupta2 papers

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:human· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Prashanth SuravajhalaiD· 2 shared Ashwani KumariD· 1 shared Ashwani Kumar Mishra· 1 shared Ayam GuptaiD· 1 shared Krishna Mohan MedicherlaiD· 1 shared Praveen MathuriD· 1 shared Suresh Kumar Jatawa· 1 shared

Activity by Year

2019-2019 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 12 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Prashanth SuravajhalaORCID

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2 papers

Recent·Most cited

Genetic & Genomic MedicinemedRxivPreprintDec 10, 2019

Whole exome-trio analysis reveals rare variants associated with Congenital Pouch Colon

Sonal Gupta, Praveen Mathur, Ashwani Kumar Mishra…·Prashanth Suravajhala

The paper identifies rare de novo mutations in CPC patients using whole exome sequencing and highlights candidate genes associated with the disorder.

2 citations

humanwhole-exome sequencing

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BioinformaticsbioRxivPreprintNov 9, 2019

A Simplest Bioinformatics Pipeline for Whole Transcriptome Sequencing: Overview of the Processing and Steps from Raw Data to Downstream Analysis.

Ayam Gupta, Sonal Gupta, Suresh Kumar Jatawa…·Prashanth Suravajhala

The paper benchmarks the cufflinks-cuffdiff pipeline for RNA-Seq analysis and provides a protocol for whole transcriptome shotgun sequencing and downstream analysis.

3 citations

bulk RNA-seqstatistical model

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