Author

Heba M. M. Ibrahim

Centre National de la Recherche ScientifiqueORCID 0000-0003-0603-7755Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Organism:fungi (other)· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Stefan KuschiD· 3 shared Sylvain RaffaeleiD· 2 shared Anne Loos· 1 shared Catherine ZanchettaiD· 1 shared Cécile DonnadieuiD· 1 shared Céline Lopez‐RoquesiD· 1 shared Ella Doykova· 1 shared Florian KümmeliD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Stefan KuschORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsbioRxivPreprintMay 8, 2025

Resources for molecular studies of unculturable obligate biotrophic fungal plant pathogens using their saprotrophic relatives

Anne Loos, Ella Doykova, Jiangzhao Qian…·Stefan Kusch

The paper establishes Arachnopeziza species as a model system for studying powdery mildew fungi by generating their genome assemblies and demonstrating genetic modification capabilities.

DOI 10.1101/2025.05.08.652889

whole-genome sequencingexperimental assay

𝕏 PostBluesky

GenomicsThe ISME JournalPeer-reviewedJul 19, 2021

Transcriptional response to host chemical cues underpins expansion of host range in a fungal plant pathogen lineage

Stefan Kusch, Justine Larrouy, Heba M. M. Ibrahim…·Sylvain Raffaele

The paper identifies host-specific transcriptional programs in a fungal plant pathogen and shows cis-regulatory variation contributes to host range expansion.

43 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky

GenomicsMolecular Plant PathologyPeer-reviewedOct 28, 2020

Genome-wide alternative splicing profiling in the fungal plant pathogen Sclerotinia sclerotiorum during the colonization of diverse host families

Heba M. M. Ibrahim, Stefan Kusch, Marie Didelon, Sylvain Raffaele

This study identifies alternative splicing events in Sclerotinia sclerotiorum during host colonization, revealing host-specific transcript variation and potential functional diversity in secreted proteins.

45 citations

fungi (other)whole-genome sequencing

𝕏 PostBluesky