Céline Lopez‐Roques

This study improves genome assemblies of Noccaea caerulescens accessions and identifies gene copy number variations linked to metal hyperaccumulation and adaptation.

The paper analyzes the population structure and genetic diversity of Foc TR4 using whole genome sequences to trace its origin and migration patterns.

This paper presents a chromosome-level genome assembly and annotation of the pine processionary moth, improving upon previous assemblies and providing resources for population genomics research.

The paper presents an improved pea genome assembly using long-read sequencing and other techniques, resulting in a highly contiguous and complete genome resource.

The paper presents the telomere-to-telomere genome of Xiphinema index, revealing HGTs related to plant parasitism and an unprecedented epigenetic toolkit in nematodes.

This study identifies genetic changes in Noccaea caerulescens that correlate with nickel hyperaccumulation, showing that NcIRT1 mutations can cause loss of the trait.

The paper presents a high-quality genome assembly of Meloidogyne enterolobii using long-read sequencing and a gap-aware transformer model.

This study examines the Z-chromosome evolution in Morpho butterflies, finding increased genomic rearrangements and positive selection, suggesting a role in speciation through pre- and post-zygotic isolation.

The paper presents a high-quality genome assembly for the black honey bee (Apis mellifera mellifera) and demonstrates its utility for structural variant genotyping and pan-genome analysis.

The paper compares genomes across multiple fish species to study the evolutionary changes in the amhr2bY gene, a key sex-determining gene, revealing gains and losses in different Percidae species.

The paper analyzes the genomes of Enterococcus cecorum isolates to identify genetic features associated with clinical disease and track their spread.

The paper identifies and characterizes multiple protein complexes associated with MRG15 and MRGX, revealing their roles in chromatin modification and transcription regulation.

The paper identifies a truncated duplication of the amhr2 gene on the Y chromosome in Pangasiid catfishes as a conserved master sex-determining gene.

The paper identifies host-specific transcriptional programs in a fungal plant pathogen and shows cis-regulatory variation contributes to host range expansion.

The paper presents a high-quality draft genome assembly of Oryzias javanicus, focusing on its adaptation to salinity.

The paper presents a chromosome-scale genome assembly of yellow perch and identifies a Y-specific duplication of the amhr2 gene as a candidate sex determination gene.

The paper assembles and annotates the Vitis riparia grape genome using long-read and linked-read sequencing, providing a resource for genetic analysis and breeding.