Author

Attayeb S. Mohsen

National Institute of Biomedical Innovation, Health and NutritionORCID 0000-0003-0690-8012Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:metagenomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Kenji MizuguchiiD· 2 shared Ahmed B. AlarabiiD· 1 shared Chihiro HiguchiiD· 1 shared Fadi T. KhasawnehiD· 1 shared Fatima Z. AlshbooliD· 1 shared Rodolfo S. Allendes OsorioiD· 1 shared Y. Ann CheniD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 12 mutual co-author links

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2 shared papersBioinformatics

Kenji MizuguchiORCID

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2 papers

Recent·Most cited

BioinformaticsFrontiers in BioinformaticsPeer-reviewedJul 1, 2022

Snaq: A Dynamic Snakemake Pipeline for Microbiome data analysis with QIIME2

Attayeb S. Mohsen, Y. Ann Chen, Rodolfo S. Allendes Osorio…·Kenji Mizuguchi

Snaq automates 16S microbiome data analysis with QIIME2 using a Snakemake pipeline, reducing manual effort and parameter confusion through a single command-line instruction.

13 citations

metagenomicsexperimental assay

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Systems BiologybioRxivPreprintSep 1, 2021

Co-expression analysis to identify key modules and hub genes associated with COVID19 in Platelets

Ahmed B. Alarabi, Attayeb S. Mohsen, Kenji Mizuguchi…·Fadi T. Khasawneh

The paper uses co-expression analysis to identify gene modules and hub genes associated with COVID19 in platelets, revealing pathways linked to platelet activation and thrombosis.

DOI 10.1101/2021.09.01.458644

humanbulk RNA-seq

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