Author

Simonas Marcišauskas

Chalmers University of TechnologyORCID 0000-0003-0770-6383Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:variant calling· 1 Organism:yeast· 1

Frequent Co-Authors

Jens NielseniD· 2 shared Benjamín J. SáncheziD· 1 shared Boyang JiiD· 1 shared Daniel Hermansson· 1 shared Eduard Johannes KerkhoveniD· 1 shared Hao WangiD· 1 shared Iván DomenzainiD· 1 shared Rasmus ÅgreniD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 22 mutual co-author links

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2 shared papersSystems Biology

Jens NielsenORCID

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2 papers

Recent·Most cited

Systems BiologyBMC BioinformaticsPeer-reviewedNov 6, 2019

Reconstruction and Analysis of a Kluyveromyces marxianus Genome-scale Metabolic Model

Simonas Marcišauskas, Boyang Ji, Jens Nielsen

The paper presents a genome-scale metabolic model for Kluyveromyces marxianus, iSM996, which predicts carbon source utilization and growth under different temperatures.

62 citations

yeastwhole-genome sequencing

𝕏 PostBluesky

Systems BiologyPLoS Computational BiologyPeer-reviewedOct 18, 2018

RAVEN 2.0: a versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor

Hao Wang, Simonas Marcišauskas, Benjamín J. Sánchez…·Eduard Johannes Kerkhoven

RAVEN 2.0 is a toolbox for metabolic network reconstruction, demonstrating its ability to generate accurate GEMs for Streptomyces coelicolor and improve existing models.

383 citationstop 1%

bacteria (other)whole-genome sequencing

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