Author

Moon Ki Kim

Sungkyunkwan UniversityORCID 0000-0003-0819-5909Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Biochemistry· 1 Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Approach:deep learning· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Organism:human· 1 Research Focus:protein folding & dynamics· 1 Assay:protein structure· 1

Frequent Co-Authors

Sangjae SeoiD· 2 shared Soon Woo ParkiD· 2 shared Byung Ho LeeiD· 1 shared Hyeonjae LeeiD· 1 shared Hyojung PaikiD· 1 shared Junehawk LeeiD· 1 shared Jung Woo ParkiD· 1 shared Moon‐ki ChoiiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiochemistry

Sangjae SeoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 16, 2026

ELiAH2: update of the atlas of E3 ligases in human tissues by integrating tissue-specificity and docking properties of ligands for targeted protein degradation

서상재, Seunghun Song, Younghoon Kim…·Hyojung Paik

ELiAH2 expands the E3 ligase atlas by integrating tissue-specific RNA-seq and docking data to support targeted protein degradation candidate prioritization.

DOI 10.64898/2026.10.10.758184

humanbulk RNA-seq

𝕏 PostBluesky

BiochemistryThe Journal of Physical Chemistry BPeer-reviewedMar 7, 2025

Thermodynamic Parameter Estimation for Modified Oligonucleotides Using Molecular Dynamics Simulations

Soon Woo Park, Junehawk Lee, Jung Woo Park…·Sangjae Seo

This study estimates thermodynamic parameters for RNA/DNA hybrid duplexes using MD simulations, finding MMGBSA provides more accurate predictions than MMPBSA for modified oligonucleotides.

1 citation

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

BiophysicsProtein SciencePeer-reviewedFeb 25, 2025

An accelerated molecular dynamics study for investigating protein pathways using the bond-boost hyperdynamics method

Soon Woo Park, Moon‐ki Choi, Byung Ho Lee…·Moon Ki Kim

This paper introduces an accelerated MD method based on bond-boost hyperdynamics to study protein conformational transitions, validated using Adenylate kinase simulations.

3 citations

protein structuredeep learning

𝕏 PostBluesky