Author

Matthew D. Shirley

Novartis (Switzerland)ORCID 0000-0003-0855-9274Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Approach:statistical model· 1

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Javad Golji· 1 shared Joshua M. KorniD· 1 shared Viveksagar Krishnamurthy Radhakrishna· 1 shared

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2020-2020 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Javad Golji

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintDec 1, 2020

PISCES: a package for rapid quantitation and quality control of large scale mRNA-seq datasets

Matthew D. Shirley, Viveksagar Krishnamurthy Radhakrishna, Javad Golji, Joshua M. Korn

PISCES provides a Python package for efficient mRNA-seq data processing, including quantitation, quality control, and differential expression analysis.

6 citations

bulk RNA-seqstatistical model

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