Author

Turgut Yigit Akyol

Aarhus UniversityORCID 0000-0003-0897-7716Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Assay:metagenomics· 1

Frequent Co-Authors

Stig Uggerhøj AnderseniD· 3 shared B Kirtley AmosiD· 1 shared Cranos WilliamsiD· 1 shared Damien FormeyiD· 1 shared Dugald E. ReidiD· 1 shared Eber Villa-RodrígueziD· 1 shared Emanuel Pacheco· 1 shared Heladia SalgadoiD· 1 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersPlant Biology

Stig Uggerhøj AndersenORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Plant BiologybioRxivPreprintMar 4, 2026

A high-quality genome assembly and integrative data portal (Phabase) for the Mesoamerican black bean (Phaseolus vulgaris cv. Negro Jamapa)

Turgut Yigit Akyol, Eber Villa-Rodríguez, Heladia Salgado…·Jesús Montiel

The paper presents a high-quality genome assembly for the Mesoamerican black bean variety Negro Jamapa and introduces Phabase, a database integrating genomic and transcriptomic data for functional genomics and breeding.

DOI 10.64898/2025.12.09.693262

plant (other)bulk RNA-seq

𝕏 PostBluesky

BioinformaticsBioData MiningPeer-reviewedFeb 19, 2026

KeySDL: Sparse Dictionary Learning for Keystone Microbe Identification

Max Gordon, Turgut Yigit Akyol, B Kirtley Amos…·Cranos Williams

KeySDL identifies keystone microbes using sparse dictionary learning and GLV dynamics assumptions, enabling accurate predictions from limited data.

DOI 10.1186/s13040-026-00527-3

metagenomicsstatistical model

𝕏 PostBluesky

GenomicsDNA ResearchPeer-reviewedJun 1, 2020

Insights into the evolution of symbiosis gene copy number and distribution from a chromosome-scale Lotus japonicus Gifu genome sequence

Nadia M. Kamal, Terry Mun, Dugald E. Reid…·Stig Uggerhøj Andersen

The paper presents a chromosome-scale genome assembly for L. japonicus Gifu, revealing differences in symbiotic gene organization compared to Medicago truncatula.

66 citationstop 4%

multiple specieswhole-genome sequencing

𝕏 PostBluesky