Stig Uggerhøj Andersen

This study identifies L-tyrosine oxidase candidates and TyrA genes in faba bean, showing that VfADH increases L-tyrosine and L-DOPA derivatives in N. benthamiana.

The paper develops a semi-automated image analysis method for root phenotyping and estimates genomic breeding values for root traits in faba bean and white clover, showing genetic correlations with field yield.

The paper identifies a rare population of root hair cells in legumes that are pre-specified for rhizobial infection through transcriptional specialization, regulated by ethylene and conserved across species.

The paper identifies RHD6LA as a gene required for root hair responses to both symbiotic rhizobia and commensal soil bacteria using single-cell RNA sequencing.

The paper presents a high-quality genome assembly for the Mesoamerican black bean variety Negro Jamapa and introduces Phabase, a database integrating genomic and transcriptomic data for functional genomics and breeding.

KeySDL identifies keystone microbes using sparse dictionary learning and GLV dynamics assumptions, enabling accurate predictions from limited data.

This study identifies QTLs associated with freezing tolerance in winter faba bean using GWAS, providing genomic targets for marker-assisted breeding.

This study maps agronomic trait genetics and identifies selection signatures in faba bean germplasm using genome-wide association studies and population structure analysis.

The paper presents a chromosome-scale genome assembly for L. japonicus Gifu, revealing differences in symbiotic gene organization compared to Medicago truncatula.

The paper analyzes introgression and selection patterns in symbiosis genes within Rhizobium leguminosarum isolates, finding limited introgression confined to plasmids and chromosomal islands.

Syntenizer 3000 filters paralogs from gene groups using synteny analysis to identify true syntelogs and provides tools for visualization and classification.

The paper analyzes NLR gene expression across plant species to show organ-specific expression patterns, with Brassicaceae showing unique shoot-biased expression linked to symbiotic pathway loss.