Author

Ying-Ning Ho

National Taiwan Ocean UniversityORCID 0000-0003-0943-1416Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Chia-Ho LiuiD· 2 shared Chieh-Chen HuangiD· 2 shared Chih‐Horng KuoiD· 2 shared En‐Pei Isabel ChiangiD· 2 shared Hau‐Hsuan HwangiD· 2 shared Shih-Hsun Walter HungiD· 2 shared Tsai-Ching HuangiD· 2 shared Che‐Chun Chen· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersPlant Biology

Chia-Ho LiuORCID

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3 papers

Recent·Most cited

Plant BiologyPhysiologia PlantarumPeer-reviewedApr 30, 2026

Endophytic pyrroloquinoline quinone enhances banana growth and immunity against Fusarium wilt for plant-microbe mutualisms

Shih-Hsun Walter Hung, Man-Yun Yu, Chia-Ho Liu…·Chieh-Chen Huang

This study investigates how PQQ from an endophytic bacterium enhances banana growth and immunity against Fusarium wilt through systemic immunity and metabolic regulation.

4 citations

plant (other)bulk RNA-seq

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GenomicsbioRxivPreprintApr 1, 2025

A high-quality chromosome-level genome of an undescribed Meretrix species using Nanopore and Hi-C technologies

Che‐Chun Chen, Te‐Hua Hsu, Henry Horng‐Shing Lu…·Ying-Ning Ho

The paper presents three reference genomes for Meretrix species, including a chromosome-level assembly using Nanopore and Hi-C technologies, and reports genomic insights for conservation.

DOI 10.1101/2025.04.01.646383

whole-genome sequencingexperimental assay

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MicrobiologyISME CommunicationsPeer-reviewedJan 1, 2024

A cyclic dipeptide for salinity stress alleviation and the trophic flexibility of an endophyte reveal niches in salt marsh plant-microbe interactions

Shih-Hsun Walter Hung, Pin-Hsien Yeh, Tsai-Ching Huang…·Chieh‐Chen Huang

This study identifies a cyclic dipeptide from an endophytic bacterium that alleviates salinity stress in plants, revealing insights into plant-microbe interactions in salt marshes.

17 citations

Arabidopsismetabolomics

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