Author

Matteo Benelli

Azienda Usl Toscana CentroORCID 0000-0003-1227-356XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Francesca DemichelisiD· 2 shared Agostina NardoneiD· 1 shared Alice SantiiD· 1 shared Chiara BiagioniiD· 1 shared Dario RomagnoliiD· 1 shared Domenica ScumaciiD· 1 shared Elisa GiannoniiD· 1 shared Elisa SalviatoiD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersCancer Biology

Francesca DemichelisORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMar 2, 2026

ASPARAGINE-RICH METASTATIC NICHES DRIVE PROSTATE CANCER ORGANOTROPISM BY ENABLING TRANSLATIONAL REWIRING TOWARD N-GLYCOSYLATED PROTEINS

Erica Pranzini, Luigi Ippolito, Marta Iozzo…·Elisa Giannoni

This study identifies asparagine (Asn) in bone and lung niches as a metabolic driver of prostate cancer metastasis by promoting N-glycosylation and adhesion.

DOI 10.64898/2026.02.27.708521

humanproteomics

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Cancer BiologyGenome MedicinePeer-reviewedFeb 3, 2026

Sensitive tumor detection, accurate quantification, and cancer subtype classification using low-pass whole methylome sequencing of plasma DNA

Marta Paoli, Francesca Galardi, Agostina Nardone…·Matteo Benelli

This paper introduces METER, a computational tool that enables sensitive tumor detection, accurate quantification, and cancer subtype classification using low-pass whole methylome sequencing of plasma DNA.

2 citations

humanDNA methylation

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GeneticsNucleic Acids ResearchPeer-reviewedNov 10, 2022

CHD8 Suppression Impacts on Histone H3 Lysine 36 Trimethylation and Alters RNA Alternative Splicing.

Emanuela Kerschbamer, Michele Arnoldi, Takshashila Tripathi…·Marta Biagioli

This study shows that CHD8 suppression reduces H3K36me3 levels and alters alternative splicing of ~2000 genes, linking CHD8 to RNA processing and ASD.

27 citations

humanChIP-seq

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