Author

Dorothea Lindtke

University of BernORCID 0000-0003-1339-1410Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Approach:Bayesian inference· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1

Frequent Co-Authors

C. Alex BuerkleiD· 1 shared Elizabeth G. MandevilleiD· 1 shared Paula E. AdamsiD· 1 shared Sam YeamaniD· 1 shared Thomas Lee ParchmaniD· 1 shared Vivaswat ShastryiD· 1 shared Zachariah GompertiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 15 mutual co-author links

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1 shared paperGenetics

C. Alex BuerkleORCID

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2 papers

Recent·Most cited

GeneticsMolecular Ecology ResourcesPeer-reviewedJan 23, 2021

Model-based genotype and ancestry estimation for potential hybrids with mixed-ploidy

Vivaswat Shastry, Paula E. Adams, Dorothea Lindtke…·C. Alex Buerkle

The paper extends a Bayesian model to estimate genotype and ancestry in autopolyploid and mixed-ploidy individuals using low-depth sequencing data.

73 citationstop 2%

Arabidopsiswhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJun 25, 2020

rearrvisr: an R package to detect, classify, and visualize genome rearrangements

Dorothea Lindtke, Sam Yeaman

rearrvisr detects, classifies, and visualizes genome rearrangements by projecting them onto a reference genome, achieving high precision and recall on simulated data.

DOI 10.1101/2020.06.25.170522

Drosophilawhole-genome sequencing

𝕏 PostBluesky