Author

Satoshi Yuhara

Nationwide Children's HospitalORCID 0000-0003-1375-3848Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:Hi-C· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:proteomics· 1

Frequent Co-Authors

Adrienne Morrison· 1 shared Ashley Zhou· 1 shared Aymen NaguibiD· 1 shared Christopher K. BreueriD· 1 shared Christopher T. McKeeiD· 1 shared David R. BrigstockiD· 1 shared Fahd Taha· 1 shared Felipe TakaesuiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Adrienne Morrison

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 4, 2026

The Fontan EV Score: A Circulating Extracellular Vesicle-Based Risk Stratification Tool for Fontan-Associated Liver Disease

Felipe Takaesu, Xinlei Li, Jennifer C. Kievert…·Michael E. Davis

This paper develops the Fontan EV Score, a non-invasive biomarker using circulating extracellular vesicles to predict Fontan-associated liver disease severity, outperforming existing serological indices.

DOI 10.64898/2026.07.31.742169

humanproteomics

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BioinformaticsbioRxivPreprintMay 18, 2022

HiCUP-Plus: a fast open-source pipeline for accurately processing large scale Hi-C sequence data

S. Thomas Kelly, Satoshi Yuhara

HiCUP-Plus improves Hi-C data processing by integrating HiSAT2 and Dragen aligners, enhancing speed and accuracy while maintaining compatibility with Bowtie2.

3 citations

Hi-Cexperimental assay

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Molecular BiologybioRxivPreprintJan 19, 2021

Evaluation of the effects of SARS-CoV-2 genetic mutations on diagnostic RT-PCR assays

Takeru Nakabayashi, Yuki Kawasaki, Koichiro Murashima…·Satoshi Yuhara

This study evaluates how SARS-CoV-2 mutations affect RT-PCR assay sensitivity by analyzing sequence variability in primer/probe binding regions.

4 citations

virusbulk RNA-seq

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