Megan Miaro

The paper develops a new RNA folding model using in vivo-like ionic conditions, improving tRNA structure prediction but showing minimal overall impact on secondary structure predictions.

This paper presents nearest neighbor parameters for estimating RNA folding stability with pseudouridine, derived from optical melting experiments, and demonstrates their application in modeling RNA secondary structures.

This paper develops new RNA folding nearest neighbor parameters for sequences containing 1-methyl-pseudouridine, showing it stabilizes RNA folding and improves tRNA ensemble modeling.

The paper identifies an siRNA effective against a modified circRNA, showing it can be targeted but with variable efficacy.