Author

Einar Bjarki Gunnarsson

University of MinnesotaORCID 0000-0003-1768-8473Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Assay:imaging· 1

Frequent Co-Authors

Jasmine FooiD· 2 shared Abigail Coleman· 1 shared Benedikt Vilji Magnússon· 1 shared Brandon Choi· 1 shared Eileen FungiD· 1 shared Elizabeth EltoniD· 1 shared Hanaa Knaneh-Monem· 1 shared Kevin LederiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioengineering

Jasmine FooORCID

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2 papers

Recent·Most cited

BioengineeringbioRxivPreprintJul 31, 2026

Systematic modeling of phenotypic drug response profiles inpatient-derived organoids

Seungil Kim, Einar Bjarki Gunnarsson, Michael E. Doche…·Shannon M. Mumenthaler

The paper introduces SCOPE, a method using AI and time-lapse imaging to classify drug responses in organoids into four phenotypic groups, identifying new drug effects and therapeutic uses.

DOI 10.64898/2026.07.29.741618

humanimaging

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BioinformaticsJournal of Theoretical BiologyPeer-reviewedJul 1, 2023

Statistical inference of the rates of cell proliferation and phenotypic switching in cancer

Einar Bjarki Gunnarsson, Jasmine Foo, Kevin Leder

This paper develops a statistical framework to estimate cell proliferation and phenotypic switching rates in cancer using cell line experiment data and applies it to a public dataset.

15 citations

statistical model

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