Author

Ali Ghodsi

University of WaterlooORCID 0000-0003-1866-246XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Assay:protein sequence· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Benyamin Jamialahmadi· 1 shared Mahmood Chamankhah· 1 shared Mohammad KohandeliD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperImmunology

Benyamin Jamialahmadi

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1 paper

Recent·Most cited

ImmunologybioRxivPreprintJul 16, 2024

Conditional Sequence-Structure Integration: A Novel Approach for Precision Antibody Engineering and Affinity Optimization

Benyamin Jamialahmadi, Mahmood Chamankhah, Mohammad Kohandel, Ali Ghodsi

This paper introduces a method to design antibodies by integrating antigen structure and sequence using a protein structural encoder and antibody language model, achieving better performance than existing methods.

DOI 10.1101/2024.07.16.603820

protein sequencedeep learning

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