Author

Jan F. Gogarten

Robert Koch InstituteORCID 0000-0003-1889-4113Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:non-human primate· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:metagenomics· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Ariane DüxiD· 2 shared Verena J. SchuenemanniD· 2 shared Alexander K. LangiD· 1 shared Alexandre Gomes VizzoniiD· 1 shared Ana María Bispo de FilippisiD· 1 shared Ana Paula Teixeira Monteiro· 1 shared Andrea Surrage Calheiros· 1 shared Anne‐Céline GranjoniD· 1 shared

Activity by Year

2017-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersGenomics

Ariane DüxORCID

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Author profile →

3 papers

Recent·Most cited

GenomicsMicrobial GenomicsPeer-reviewedOct 30, 2020

Geographically structured genomic diversity of non-human primate-infecting Treponema pallidum subsp. pertenue

Benjamin Mubemba, Jan F. Gogarten, Verena J. Schuenemann…·Sébastien Calvignac‐Spencer

The paper characterizes the genomic diversity of Treponema pallidum subsp. pertenue in non-human primates across sub-Saharan Africa, finding geographic clustering of strains rather than host or symptom-based clades.

12 citations

non-human primateDNA methylation

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GenomicsScientific ReportsPeer-reviewedFeb 26, 2019

Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection

Thiago Moreno L. Souza, Yasmine Rangel Vieira, Edson Oliveira Delatorre…·Nischay Mishra

61 citationstop 2%

humanmetagenomics

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MicrobiologybioRxivPreprintMay 10, 2017

African Nonhuman Primates Are Infected With The Yaws Bacterium Treponema pallidum subsp. pertenue

Sascha Knauf, Jan F. Gogarten, Verena J. Schuenemann…·Sébastien Calvignac-Spencer

The paper identifies naturally occurring simian Treponema pallidum subsp. pertenue strains in African nonhuman primates, showing genomic similarity to human TPE strains.

DOI 10.1101/135491

non-human primatewhole-genome sequencing

𝕏 PostBluesky