Author

Yasmine Rangel Vieira

Instituto Nacional de Infectologia Evandro ChagasORCID 0009-0004-7340-7044Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Assay:metagenomics· 2 Research Focus:variant calling· 2 Research Focus:phylogenetics / evolution· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Fernando A. BozzaiD· 3 shared Giselle Barbosa-Lima· 3 shared Thiago Moreno L. SouzaiD· 3 shared Aaron E. LiniD· 2 shared Adrianne D. GladdeniD· 2 shared Amanda L. TaniD· 2 shared Andreas GnirkeiD· 2 shared Christian B. Matranga· 2 shared

Activity by Year

2017-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Fernando A. BozzaORCID

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Author profile →

3 papers

Recent·Most cited

Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection

Thiago Moreno L. Souza, Yasmine Rangel Vieira, Edson Oliveira Delatorre, Giselle Barbosa-Lima, Raul Leal Faria Luiz, Alexandre Gomes Vizzoni, Komal Jain, Milene Dias Miranda, Nishit Bhuva, Jan F. Gogarten, James Ng, Riddhi Thakkar, Andrea Surrage Calheiros, Ana Paula Teixeira Monteiro, Patrícia Torres Bozza, , Nischay Mishra

Scientific Reports · Feb 26, 2019Peer-reviewedGenomics

Capturing diverse microbial sequence with comprehensive and scalable probe design

Hayden C. Metsky, Katherine J. Siddle, Adrianne D. Gladden, James Qu, David K. Yang, Patrick Brehio, Andrew Goldfarb, Anne L Piantadosi, Shirlee Wohl, Amber Carter, Aaron E. Lin, Kayla G. Barnes, Damien C. Tully, Björn Corleis, Scott Hennigan, , Christian B. Matranga

The paper introduces CATCH, a method for designing compact and scalable probe sets to enhance metagenomic sequencing sensitivity, demonstrating improved viral genome recovery and diversity preservation.

Nature Biotechnology · Feb 1, 2019Peer-reviewedGenomics

Genome sequencing reveals Zika virus diversity and spread in the Americas

Hayden C. Metsky, Christian B. Matranga, Shirlee Wohl, Stephen F. Schaffner, Catherine A. Freije, Sarah M. Winnicki, Kendra L. West, James Qu, Mary Lynn Baniecki, Adrianne D. Gladden, Aaron E. Lin, Christopher H. Tomkins-Tinch, Simon H. Ye, Daniel J. Park, Cynthia Y. Luo, , Pardis Christine Sabeti

This study sequenced 110 Zika virus genomes from 10 countries, revealing rapid expansion in Brazil, multiple introductions into other regions, and undetected circulation before confirmed cases.

Nature · May 23, 2017Peer-reviewedGenomics