Author

Nils Arrigo

Sophia Genetics (Switzerland)ORCID 0000-0003-1966-9639Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Tomasz SuchaniD· 2 shared Anna Kostikova· 1 shared Camille Pitteloud· 1 shared Charlotte Mouden· 1 shared Chloé Riou· 1 shared Claire LemaitreiD· 1 shared Jaume BonetiD· 1 shared Jérémy GauthieriD· 1 shared

Activity by Year

2016-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Tomasz SuchanORCID

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3 papers

Recent·Most cited

GenomicsVirusesPeer-reviewedOct 20, 2021

Mutational hotspot in the SARS-CoV-2 Spike protein N-terminal domain conferring immune escape potential

Slawomir Kubik, Nils Arrigo, Jaume Bonet, Zhenyu Xu

16 citations

virusstatistical model

𝕏 PostBluesky

BioinformaticsPeerJPeer-reviewedJun 10, 2020

DiscoSnp-RAD: de novo detection of small variants for population genomics

Jérémy Gauthier, Charlotte Mouden, Tomasz Suchan…·Pierre Peterlongo

DiscoSnp-RAD efficiently detects small variants in RAD-Seq data, revealing population structure and outperforming existing tools in speed.

23 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsPLOS ONEPeer-reviewedMar 21, 2016

Hybridization capture using RAD probes (hyRAD), a new tool for performing genomic analyses on museum collection specimens.

Tomasz Suchan, Camille Pitteloud, Nadezhda Gerasimova…·Nadir Alvarez

The paper introduces hyRAD, a method for sequencing degraded DNA samples from museum specimens by hybridizing RAD fragments to genomic libraries, enabling orthologous locus analysis.

DOI 10.1371/journal.pone.0151651

whole-genome sequencingexperimental assay

𝕏 PostBluesky