Jianwei Chen

The paper identifies denitrification genotypes in Bacillota using HMMs and genome-resolved metagenomics, finding complete denitrification potential in several MAGs and 17 genera.

This study uses metatranscriptomics to analyze carbon fixation potentials across plankton lineages in the South China Sea, revealing lineage-specific contributions and the role of proteorhodopsin in non-Calvin carbon fixation.

MetaTrass improves metagenome assembly by binning first and assembling later, producing more high-quality draft genomes from human gut microbiome samples.

Symbiont-Screener separates host sequences from contaminants in long reads or co-barcoded reads using unsupervised clustering without reference alignment, achieving high accuracy in simulated and real data.