Author

Emma Bell

Stockholm UniversityORCID 0000-0002-2064-6496Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Casey R. J. HubertiD· 2 shared Alexandre J. Paquette· 1 shared Alexis FonsecaiD· 1 shared Alf M. NorkkoiD· 1 shared Alyse K. Hawley· 1 shared Anders F. AnderssoniD· 1 shared Anirban ChakrabortyiD· 1 shared Bengt KarlsoniD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersMicrobiology

Casey R. J. HubertORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

The marine microbiome can accurately predict its chemical and biological environment

Emma Bell, Karin Garefelt, Krzysztof T Jurdzinski, Luis F. Delgado, Fanny Lindrooth, Bengt Karlson, Anders F. Andersson

This study uses DNA metabarcoding to predict environmental parameters and plankton communities in the Baltic Sea, showing its effectiveness compared to traditional methods.

Communications Earth & Environment · Jun 15, 2026Peer-reviewedMicrobiology

Infauna selectively enhance DNA virus diversity and activity in marine sediments

Alexis Fonseca, Mathias Middelboe, Karin Holmfeldt, Emma Bell, Christoph Humborg, Alf M. Norkko, Francisco J. A. Nascimento

The paper investigates how infauna affect DNA and RNA virus communities in marine sediments, finding increased DNA virus abundance and activity under higher infauna conditions.

bioRxiv · Mar 18, 2026 · PreprintMicrobiology

Denitrification genotypes of endospore-forming Bacillota

Emma Bell, Jianwei Chen, William Daniel Loty Richardson, Milovan Fustic, Casey R. J. Hubert

The paper identifies denitrification genotypes in Bacillota using HMMs and genome-resolved metagenomics, finding complete denitrification potential in several MAGs and 17 genera.

ISME Communications · Jan 1, 2024Peer-reviewedMicrobiology

CANT-HYD: A curated database of phylogeny-derived Hidden Markov Models for annotation of marker genes involved in hydrocarbon degradation

Varada Khot, Jackie Zorz, Daniel A. Gittins, Anirban Chakraborty, Emma Bell, María A. Bautista, Alexandre J. Paquette, Alyse K. Hawley, Breda Novotnik, Casey R. J. Hubert, Marc Strous, Srijak Bhatnagar

CANT-HYD provides a database of HMMs for annotating hydrocarbon degradation marker genes, showing widespread metabolic potential and scalability in metagenomic analysis.

Frontiers in Microbiology · Jan 5, 2022Peer-reviewedBioinformatics