Tiago Lubiana

The scFAIR Consortium develops a unified metadata schema and portal to improve FAIRness of scRNA-seq data through standardized annotations and semantic search.

The paper maps PanglaoDB cell-type markers to Wikidata to enhance reusability and FAIRness, creating structured associations and demonstrating new biological insights.

The paper introduces the Bioregistry, an open metaregistry that integrates and expands existing biomedical entity registries to improve interoperability and data reuse.

The paper introduces WikiGOA, a gene set enrichment analysis method using Wikipedia and Gene Ontology, showing it provides understandable results for gene expression data analysis.

The paper introduces the fcoex package, which infers coexpression modules from scRNA-seq data to identify overlapping cell classes and improve cell type atlases.

The paper introduces an Alexa Assistant tailored for laboratory routines to improve efficiency and reduce stress.

This study shows that zebrafish lacking sp7 can replace teeth without attachment bone, but with poor differentiation and abnormal tooth orientation.