Author

Jazmine Brimhall

BC Cancer AgencyORCID 0000-0003-2692-0035Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:statistical model· 3 Research Focus:clustering· 2 Research Focus:differential expression· 2 Assay:scRNA-seq· 2 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Beixi WangiD· 4 shared Daniel LaiiD· 4 shared Farhia KabeeriD· 4 shared Justina BieleiD· 4 shared Samuel A. J. R. AparicioiD· 4 shared Sohrab P. ShahiD· 4 shared Emma Laks· 3 shared Richard A. MooreiD· 3 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersGenomics

Beixi WangORCID

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4 papers

Recent·Most cited

GenomicsGenome biologyPeer-reviewedJul 18, 2024

Single cell decoding of drug induced transcriptomic reprogramming in triple negative breast cancers

Farhia Kabeer, Hoa Tran, Mirela Andronescu…·Samuel A. J. R. Aparicio

The paper identifies genomic and non-genomic contributions to drug resistance in triple negative breast cancer using single cell transcriptomics and copy number data.

8 citations

humanscRNA-seq

𝕏 PostBluesky

GenomicsPLoS Computational BiologyPeer-reviewedSep 23, 2020

Epiclomal: probabilistic clustering of sparse single-cell DNA methylation data

Camila P. E. de Souza, Mirela Andronescu, Tehmina Masud…·Sohrab P. Shah

Epiclomal clusters sparse single-cell DNA methylation data and imputes missing values, outperforming non-probabilistic methods and revealing sub-clonal methylation patterns in tumour genomes.

33 citations

humanDNA methylation

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BioinformaticsGenome biologyPeer-reviewedMar 12, 2019

clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers

Kieran R. Campbell, Adi Steif, Emma Laks…·Sohrab P. Shah

clonealign integrates single-cell RNA and DNA sequencing data from cancer samples to identify clone-specific gene expression patterns and dysregulated pathways.

122 citationstop 3%

humanscRNA-seq

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GenomicsbioRxivPreprintSep 13, 2018

Resource: Scalable whole genome sequencing of 40,000 single cells identifies stochastic aneuploidies, genome replication states and clonal repertoires

Emma Laks, Hans Zahn, Daniel Lai…·Samuel A. J. R. Aparicio

13 citations

humanwhole-genome sequencing

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