Author

A. Gulhan Ercan‐Sencicek

Yale UniversityORCID 0000-0003-2838-3341Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Developmental Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:spatial domain detection· 2 Organism:zebrafish· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1

Frequent Co-Authors

Murat GüneliD· 3 shared Tanyeri BarakiD· 2 shared Aida Maria Bertoli‐AvellaiD· 1 shared Alice S. BrooksiD· 1 shared Amber Hogart BegtrupiD· 1 shared Amna Mohammed Al-FutaisiiD· 1 shared Anita Nikoncuk· 1 shared Anupama HemalathaiD· 1 shared

Activity by Year

2019-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersCancer Biology

Murat GünelORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintJun 17, 2026

Multicellular Spatial Programs Define the Histopathological Architecture of Meningioma

Danielle F. Miyagishima, Arman Afrasiyabi, Declan McGuone…·Murat Günel

This study identifies multicellular spatial molecular programs in meningiomas using multi-omic data and develops a model to infer these programs from histopathology.

DOI 10.64898/2026.06.16.732172

humanscRNA-seq

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Developmental BiologybioRxivPreprintMar 26, 2026

A mitochondrial program encodes brain vascular reserve

Ivan Fan Xia, Di Zhang, A. Gulhan Ercan‐Sencicek…·Stefania Nicoli

The paper shows mitochondrial state in zebrafish tip cells encodes brain collateral network topology, with microRNA-125a regulating mitochondrial function to influence vascular resilience.

DOI 10.64898/2026.03.25.714175

zebrafishimaging

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GeneticsActa NeuropathologicaPeer-reviewedDec 9, 2019

Loss of UGP2 in brain leads to a severe epileptic encephalopathy, emphasizing that bi-allelic isoform specific start-loss mutations of essential genes can cause genetic diseases

Elena Perenthaler, Anita Nikoncuk, Soheil Yousefi…·Tahsin Stefan Barakat

The paper identifies a recurrent start codon mutation in UGP2 causing a severe epileptic encephalopathy, showing that isoform-specific expression loss of an essential gene can lead to disease.

70 citationstop 3%

humanzebrafish

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