Author

Antoine Hollebecque

Institut Gustave RoussyORCID 0000-0003-2869-7551Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Fabrice AndréiD· 2 shared Mohamed Amine BaniiD· 2 shared Andrew J. AguirreiD· 1 shared Andrey A. YurchenkoiD· 1 shared Antoîne ItalianoiD· 1 shared Aurélien MarabelleiD· 1 shared Brady James· 1 shared Brian Matthew WolpiniD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenomics

Fabrice AndréORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintFeb 19, 2026

Integrated inference of cancer gene expression from cell-free plasma chromatin

Gunsagar Singh Gulati, Damien Vasseur, Rashad Nawfal…·Matthew L. Freedman

APEX infers cancer gene expression from plasma cfChIP-seq data, outperforming existing methods and enabling subtype classification and biomarker identification.

2 citations

humanChIP-seq

𝕏 PostBluesky

Cancer BiologyCancer LettersPeer-reviewedNov 9, 2025

Single-cell Transcriptome Profiling of Post-treatment and Treatment-naive Colorectal Cancer: Insights into Putative Mechanisms of Chemoresistance

Г. А. Пузанов, Clémence Astier, Dimitris Papakonstantinou…·Sergey I. Nikolaev

This study uses scRNA-seq to compare treatment-naive and post-treatment colorectal cancer samples, identifying markers and cell types associated with chemoresistance and response.

5 citations

humanscRNA-seq

𝕏 PostBluesky