Author

Shiva M. Singh

Western UniversityORCID 0000-0003-2956-7679Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Bonnie AlberryiD· 1 shared Camila P. E. de SouzaiD· 1 shared Christina A. CastellaniiD· 1 shared David J. CheniD· 1 shared Gurjit S. RandhawaiD· 1 shared Kathleen Allen HilliD· 1 shared Lila Kari AiD· 1 shared Maximillian P. M. SoltysiakiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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1 shared paperGenomics

Bonnie AlberryORCID

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2 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedMar 4, 2022

SomaticSiMu: a mutational signature simulator

David J. Chen, Gurjit S. Randhawa, Maximillian P. M. Soltysiak…·Kathleen Allen Hill

SomaticSiMu simulates mutational signatures in genomic sequences and evaluates its reliability using machine learning and mutational signature extraction.

DOI 10.1093/bioinformatics/btac128

whole-genome sequencingstatistical model

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GenomicsJournal of Neurodevelopmental DisordersPeer-reviewedMay 16, 2020

Hippocampal transcriptome analysis following maternal separation implicates altered RNA processing in a mouse model of fetal alcohol spectrum disorder

Bonnie Alberry, Christina A. Castellani, Shiva M. Singh

The paper investigates hippocampal gene expression changes in a mouse model of FASD following prenatal alcohol exposure and maternal separation, identifying altered RNA processing as a potential mechanism for anxiety-like behavior.

14 citations

mousebulk RNA-seq

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