Author

David Edwards

Monash UniversityORCID 0000-0003-2964-8620Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:phylogenetics / evolution· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Kathryn E. HoltiD· 2 shared Artika P. NathiD· 1 shared Bernard J. PopeiD· 1 shared Chiea Chuen KhoriD· 1 shared Đặng Thị Minh Hà· 1 shared David Benjamin AscheriD· 1 shared Guy Edward ThwaitesiD· 1 shared Hoang Thanh HaiiD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Kathryn E. HoltORCID

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2 papers

Recent·Most cited

GenomicsMicrobial GenomicsPeer-reviewedDec 7, 2021

SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments

David Edwards, Sebastián Duchêne, Bernard J. Pope, Kathryn E. Holt

SNPPar detects homoplasic SNPs in microbial genomes to identify convergent evolution and adaptive traits with high accuracy and efficiency.

28 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsNature GeneticsPeer-reviewedMay 20, 2018

Genomic analysis of Mycobacterium tuberculosis reveals complex etiology of tuberculosis in Vietnam including frequent introduction and transmission of Beijing lineage and positive selection for EsxW Beijing variant

Kathryn E. Holt, Paul R. McAdam, Phan Vuong Khac Thai…·Sarah J. Dunstan

212 citationstop 1%

bacteria (other)whole-genome sequencing

𝕏 PostBluesky