Author

jingchao fan

Agricultural Information InstituteORCID 0000-0003-2969-4117Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Hui ZhaoiD· 1 shared Nengfu XieiD· 1 shared qianjie lviD· 1 shared Rui Man· 1 shared X WangiD· 1 shared zhonghe zhaoiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperPlant Biology

Hui ZhaoORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintMay 13, 2026

Genomic Foundation Models Reveal Chromatin-Domain-Scale Transposable Element Impacts on Rice Genome Architecture

Jingchao Fan, Hui Zhao, qianjie lv…·zhonghe zhao

The paper introduces a genomic foundation model to detect transposable element impacts on rice genome architecture without alignment, revealing chromatin-domain-scale structural divergence.

1 citation

plant (other)whole-genome sequencing

𝕏 PostBluesky

GeneticsbioRxivPreprintFeb 24, 2026

T2T Pangenome Reveals a 3.3kb Structural Variation Driving the De Novo Evolution of a Subspecies-Specific NLR Gene in Rice

jingchao fan

The paper identifies a 3.3 kb structural variation in rice that drives the de novo evolution of a subspecies-specific NLR gene, enhancing viral immunity.

DOI 10.64898/2026.02.21.705258

plant (other)whole-genome sequencing

𝕏 PostBluesky