Kshitij Tandon

StrainSpy fits zero-inflated beta mixed models to containment ANI, reaching >98% simulated sensitivity versus ~79% for logistic regression and detecting colorectal-cancer E. coli strain shifts.

This study examines how different light wavelengths affect the photoacclimation strategies of the siphonous green alga Derbesia, revealing contrasting metabolic and photosynthetic responses under various light conditions.

The paper uses RNAseq to analyze the functional roles of different compartments in the coral holobiont Porites lutea, revealing metabolic interactions and nutrient cycling.

The paper uses genomic analysis to identify clade-specific features of Endozoicomonas bacteria and their potential roles in coral symbiosis and holobiont functioning.

This study compares metabolic models of microbial communities generated by different automated tools and a consensus approach, finding that reconstruction methods significantly affect model structure and functionality.