Author

Marieke A. G. Essers

German Cancer Research CenterORCID 0000-0003-3117-1809Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Anna MathioudakiiD· 1 shared Aryan KamaliD· 1 shared Brigitte Joanne BoumaniD· 1 shared Caroline PabstiD· 1 shared Carsten Müller‐TidowiD· 1 shared Clarissa Holitsch· 1 shared Claudia WaskowiD· 1 shared Dirk Hart· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperMolecular Biology

Anna MathioudakiORCID

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2 papers

Recent·Most cited

Molecular BiologybioRxivPreprintAug 25, 2026

Leukemic Stem Cell Subtypes Drive Distinct Niche Remodeling in Acute Myeloid Leukemia

Karin D. Prummel, Anna Mathioudaki, Ivan Berest…·Judith B. Zaugg

This study identifies a specific leukemic stem cell (LSC) subtype that drives niche remodeling in AML by altering fibroblast states and suppressing osteolineage differentiation.

DOI 10.64898/2026.08.24.746513

humanscRNA-seq

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BioinformaticsPLoS Computational BiologyPeer-reviewedSep 28, 2022

Towards reliable quantification of cell state velocities

Valérie Marot-Lassauzaie, Brigitte Joanne Bouman, Fearghal Declan Donaghy…·Laleh Haghverdi

The paper addresses issues in RNA velocity estimation from single-cell RNA-seq data and introduces two new methods for reliable velocity inference and visualization.

32 citations

mousescRNA-seq

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