Author

Anna I. Byrd

Icahn School of Medicine at Mount SinaiORCID 0000-0003-3174-1218Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 3 Research Focus:software / tool· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Avi Ma’ayaniD· 3 shared John Erol EvangelistaiD· 3 shared Sherry L. JenkinsiD· 3 shared Alexander LachmanniD· 2 shared Daniel J.B. ClarkeiD· 2 shared Ido DiamantiD· 2 shared Mano Ram MauryaiD· 2 shared Shankar SubramaniamiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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3 shared papersBioinformatics

Avi Ma’ayanORCID

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3 papers

Recent·Most cited

Scientific Communication & EducationbioRxivPreprintApr 16, 2026

The Common Fund Data Ecosystem (CFDE)

Julie A. Jurgens, Andreas Bueckle, Jeet Kiran Vora…·Casey S. Greene

The paper describes the Common Fund Data Ecosystem (CFDE), which integrates NIH Common Fund data resources to enable discovery, analysis, and collaboration across heterogeneous datasets.

1 citation

database / resource

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BioinformaticsJournal of Molecular BiologyPeer-reviewedJan 6, 2026

The CFDE Workbench: Integrating Metadata and Processed Data from Common Fund Programs

John Erol Evangelista, Daniel J.B. Clarke, Zhuorui Xie…·Avi Ma’ayan

The CFDE Workbench integrates metadata and processed data from Common Fund programs to enable FAIR and AI-ready cross-program knowledge discovery.

5 citationstop 1%

statistical modelexperimental assay

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BioinformaticsbioRxivPreprintAug 9, 2025

ChEA-KG: Human Transcription Factor Regulatory Network with a Knowledge Graph Interactive User Interface

Anna I. Byrd, John Erol Evangelista, Alexander Lachmann…·Avi Ma’ayan

ChEA-KG constructs a human transcription factor regulatory network using gene set enrichment analysis and provides an interactive web interface for network exploration and analysis.

1 citation

humanDNA methylation

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