Ido Diamant

Perturb-Seqr: Signature Search Engine Integrating Connectivity Mapping Resources

Perturb-Seqr integrates multiple Connectivity Mapping datasets to enable drug and target discovery by searching for gene expression signatures of drug and gene perturbations.

The Common Fund Data Ecosystem (CFDE)

The paper describes the Common Fund Data Ecosystem (CFDE), which integrates NIH Common Fund data resources to enable discovery, analysis, and collaboration across heterogeneous datasets.

The CFDE Workbench: Integrating Metadata and Processed Data from Common Fund Programs

The CFDE Workbench integrates metadata and processed data from Common Fund programs to enable FAIR and AI-ready cross-program knowledge discovery.