Author

Ugo Szachnowski

Centre National de la Recherche ScientifiqueORCID 0000-0003-3393-6051Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Molecular Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:yeast· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Antonin MorilloniD· 3 shared Maxime WéryiD· 2 shared Sara AndjusiD· 2 shared Anne Lafon· 1 shared Anne LopesiD· 1 shared B. Franklin PughiD· 1 shared Camille Gautier· 1 shared Chloe Walton· 1 shared

Activity by Year

2019-2024 · peak 1/yr

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10 top collaborators · 25 mutual co-author links

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3 shared papersMolecular Biology

Antonin MorillonORCID

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3 papers

Recent·Most cited

Molecular BiologyRNAPeer-reviewedMar 5, 2024

Translation is a key determinant controlling the fate of cytoplasmic long non-coding RNAs

Sara Andjus, Ugo Szachnowski, Nicolas Vogt…·Antonin Morillon

The paper shows that cytoplasmic lncRNAs in yeast are translated, affecting their abundance and post-transcriptional regulation through mechanisms involving NMD and ribosome binding.

18 citations

yeastlong-read sequencing

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Molecular BiologybioRxivPreprintMar 2, 2020

The INO80 ATP-dependent chromatin remodelling complex alleviates stalled Polymerase II to promote non-coding RNA transcription termination.

Sara Luzzi, Ugo Szachnowski, Sarah Greener…·Manolis Papamichos‐Chronakis

This study shows the INO80 complex helps RNA Polymerase II move past stalled positions, aiding non-coding RNA termination in yeast.

DOI 10.1101/2020.03.02.973685

yeastDNA methylation

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GenomicsLife Science AlliancePeer-reviewedAug 28, 2019

Endogenous RNAi pathway evolutionarily shapes the destiny of the antisense lncRNAs transcriptome

Ugo Szachnowski, Sara Andjus, Dominika Foretek…·Maxime Wéry

The paper shows that Dicer processes antisense lncRNAs into small RNAs in RNAi-capable yeast, with implications for the evolution of antisense transcriptomes.

21 citations

yeastbulk RNA-seq

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