Author

Lan Huong Nguyen

Stanford UniversityORCID 0000-0003-3397-0380Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:Bayesian inference· 1 Assay:bulk RNA-seq· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:non-human primate· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Susan HolmesiD· 2 shared Afshin Babveyh· 1 shared David Glenn SmithiD· 1 shared Giltae SongiD· 1 shared Hassan Chaı̈biD· 1 shared Hayan LeeiD· 1 shared Hoyong Lee· 1 shared Irving L. WeissmaniD· 1 shared

Activity by Year

2017-2020 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Susan HolmesORCID

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2 papers

Recent·Most cited

GenomicsGigaSciencePeer-reviewedJul 1, 2020

Chromosome-level de novo assembly of the pig-tailed macaque genome using linked-read sequencing and HiC proximity scaffolding

Morteza Roodgar, Afshin Babveyh, Lan Huong Nguyen…·Michael P. Snyder

The paper assembles the pig-tailed macaque genome using linked-read sequencing and HiC scaffolding, achieving chromosome-level resolution and identifying large-scale chromosomal rearrangements with humans.

15 citations

non-human primatewhole-genome sequencing

𝕏 PostBluesky

BioinformaticsBMC BioinformaticsPeer-reviewedSep 1, 2017

Bayesian Unidimensional Scaling for visualizing uncertainty in high dimensional datasets with latent ordering of observations

Lan Huong Nguyen, Susan Holmes

This paper introduces BUDS, a Bayesian method for visualizing uncertainty in high-dimensional datasets with latent ordering, and demonstrates its application to microbiome and gene expression data.

9 citations

bulk RNA-seqBayesian inference

𝕏 PostBluesky