Author

Raphael Raspe

Charité – Universitätsmedizin BerlinORCID 0000-0003-3409-4968Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1

Frequent Co-Authors

Helena RadbruchiD· 2 shared Adam StrzelczykiD· 1 shared Alexandra LucaciuiD· 1 shared Angelika EggertiD· 1 shared Anja Erika HauseriD· 1 shared Anna Pascual ReguantiD· 1 shared Benedikt ObermayeriD· 1 shared Carola Dietrich· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersImmunology

Helena RadbruchORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintOct 5, 2026

✦ In-depth digest

Lipocalin-2-expressing red pulp macrophages link ischemic stroke to systemic immune reprogramming in mice and humans

Alexandra Lucaciu, Patrick Wurzel, Stine Rytz Rasmussen…·Rajkumar Vutukuri

Splenic Lcn2 is induced biphasically after mouse stroke and localizes to red pulp macrophages; recombinant LCN2 induces T cell and monocyte hyporesponsiveness and monocyte phagocytosis-ROS uncoupling, with human spleen support.

DOI 10.64898/2026.06.23.733904

mousehuman

𝕏 PostBluesky

GenomicsGenome MedicinePeer-reviewedJun 10, 2026

circVDJ-seq for T cell clonotype detection in single-cell and spatial multi-omics

Izabela Plumbom, Benedikt Obermayer, Raphael Raspe…·Thomas Conrad

The paper introduces circVDJ-seq for efficient T cell receptor profiling from single-cell and spatial multi-omics data, revealing distinct immune microenvironments and T cell clonality patterns in various clinical contexts.

2 citations

humanscRNA-seq

𝕏 PostBluesky