Author

Małgorzata Marszałek-Zeńczak

Institute of Bioorganic Chemistry, Polish Academy of SciencesORCID 0000-0003-3498-3159Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Agnieszka ŻmieńkoiD· 1 shared Anastasiia SatyriD· 1 shared Anastasiia ZarembaiD· 1 shared Anna Samelak-CzajkaiD· 1 shared Annasha Dutta· 1 shared Krzysztof BrzezińskiiD· 1 shared Marek FiglerowicziD· 1 shared Michał ZeńczakiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Agnieszka ŻmieńkoORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsGenomicsPeer-reviewedSep 8, 2025

A modular pipeline for evidence-integrated genome annotation across species: a case study on Schmidtea mediterranea

Anastasiia Zaremba, Małgorzata Marszałek-Zeńczak, Annasha Dutta…·Paulina Jackowiak

The paper develops a modular genome annotation pipeline for non-model organisms, demonstrating its effectiveness in improving gene annotation in Schmidtea mediterranea.

DOI 10.1016/j.ygeno.2025.111104

whole-genome sequencinglong-read sequencing

𝕏 PostBluesky

GenomicsFrontiers in Plant SciencePeer-reviewedJan 26, 2023

Copy number variations shape the structural diversity of Arabidopsis metabolic gene clusters and are associated with the climatic gradient

Małgorzata Marszałek-Zeńczak, Anastasiia Satyr, Paweł Wojciechowski…·Agnieszka Żmieńko

The paper analyzes copy number variations in Arabidopsis thaliana metabolic gene clusters and links them to climatic adaptation.

5 citations

ArabidopsisDNA methylation

𝕏 PostBluesky