Author

Anna Samelak-Czajka

Institute of Bioorganic Chemistry, Polish Academy of SciencesORCID 0000-0002-0167-8265Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Anastasiia ZarembaiD· 1 shared Annasha Dutta· 1 shared Bart KristiD· 1 shared Jakub KubiśiD· 1 shared Jan PodkowińskiiD· 1 shared Joanna Delimata-RaczekiD· 1 shared Karolina Świtońska-KurkowskaiD· 1 shared Luiza HandschuhiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Anastasiia ZarembaORCID

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2 papers

Recent·Most cited

A modular pipeline for evidence-integrated genome annotation across species: a case study on Schmidtea mediterranea

Anastasiia Zaremba, Małgorzata Marszałek-Zeńczak, Annasha Dutta, Anna Samelak-Czajka, Paulina Jackowiak

The paper develops a modular genome annotation pipeline for non-model organisms, demonstrating its effectiveness in improving gene annotation in Schmidtea mediterranea.

Genomics · Sep 8, 2025Peer-reviewedBioinformatics

Early Neurodevelopmental Defects in Huntingtons Disease are Driven by Choroid Plexus Overgrowth and Altered Paracrine Signaling

Karolina Świtońska-Kurkowska, Jakub Kubiś, Joanna Delimata-Raczek, Bart Krist, Magda Surdyka, Żaneta Kalinowska-Pośka, Piotr Piasecki, Luiza Handschuh, Jan Podkowiński, Magdalena Rakoczy, Anna Samelak-Czajka, Michael R. Hayden, Nicholas S. Caron, Maciej Figiel

This study identifies early neurodevelopmental defects in juvenile-onset HD driven by choroid plexus overgrowth and altered paracrine signaling using organoid and mouse models.

bioRxiv · Sep 23, 2024 · PreprintDevelopmental Biology