Lucas Schiffer

The paper benchmarks gene set enrichment methods using a curated compendium of disease datasets, identifying performance differences and providing recommendations for improved analysis.

HMP16SData provides integrated 16S rRNA sequencing data from the Human Microbiome Project, enabling easier analysis for researchers with basic R skills.

The paper introduces curatedMetagenomicData, a resource providing curated metagenomic profiles for analysis in R with minimal bioinformatic expertise.

The paper introduces MultiAssayExperiment, a Bioconductor package for integrating multi-omics data, demonstrating its use with TCGA datasets to simplify analysis and visualization.